Browse of TCMCG024C25977 protein

CDS

Accession Number	TCMCG024C25977
gbkey	CDS
Protein Id	XP_022001309.1
Location	join(95237698..95237721,95238033..95238103,95238235..95238374,95238462..95238548,95238626..95238713,95238810..95238893,95238986..95239063,95239174..95239253,95240745..95240823,95240942..95241229,95242212..95242271,95242360..95242594,95243549..95243782,95244582..95245916,95246618..95246849,95247033..95247126,95247242..95247329,95247418..95247496,95247563..95247858,95247941..95248964,95249854..95250213,95250785..95251389)
Gene	LOC110898775
GeneID	110898775
Organism	Helianthus annuus

Protein

Length	1886aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA396063
db_source	XM_022145617.2
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X1 [Helianthus annuus]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACGAATGTCTTCAAAATTGGCGGTCTACATCAAGTGTCATGGTTCCAGCTTCTCCCAAACGAGTCTGATCCCATCCTATCCGACAGAAGTTTAAAGTCGAATCAAAAGGATACTGGTGCACAGTTGGTTATTTCATCCCATTTGCAATTGCAAAAAGATGGGTTTCTTAGCACATGGGGTAATTCTTTCGTTGGGCCTTGGGACCCATCGCAGGGCCTGCATAACCCTGACGAGAAAATTAAATTGTGGCTTTTTATCCCTGGTCGTCATTCATCTGTCGTCGATAAGGCCAAAGCTGCTGTATCTAAACTAAGAGTTTTTGCATCTGGATTGTGGTTAGCACCTGGGGATTCTGAAGAAGTGGCAGCAGCACTTTCTCAAGCTTTACGGAATTGTATTGAAAGAGCTTTAATGGGACTCTCATATGTGAGATTCGGGGATGTATTCTCAAGATATCATTCATCTTCACAAGGAGAGGAACTATTCAGGAGAGGCCAGCCGGTGCTTGAGTTCATCTTTACAGCAACGGAAGAAGCTGTATTTGTTCATGTCATAATATCAGCAAAGCATGTTAGGGCACTTACAAATGGTGATATGGAGACAATCTTAAAACGCACATCTAGTCATTCCGGTGTCAAGCTTCCAGTTATTGTTGCACCTCATGGAATGCGTGGCAGAATTACTGGAATTTGTCCAGGTGACCTCGTGAAGCAATTATACATCAGTTCGGGGAAGTTTAAGGCAATAAATGGAATCGTAGGTCTTCCAAACCAGTTTTCCCAAAGTTCTGGCTGCCAATTGAGGGGACAAAACTGTTATATTGAAGTAACCCTAGGGTGTGAAAATGCCGAAAGTGAAAAATCACTTCCACCAAATTCAAATACGAGCTCAAAGAATCATGTATCGGAATCTTCTAGTGTCGCAAAAGAAAATGAAAAAACGTTTATTTATCCGGCTGAGGCGGTCCTTGTCCCACTTGTGCAAACATCATCCGCTAGATCATCTCTTAAAAGATTCTGGCTCCAAAATTGGATGGGCCAGTCGTTATCCAGCTCATCATTCTCTATGCAATGTGATGCGTTCGGTACCATGGATGGATCATGGCATGATAATGACATGCAGACTCAACATGGTTACAATAGTAGTGGGAATAGTAATAGTAGTAGCATTAGCACTAGTTCATCTAGTGATAGTGATTATAGAATGACTGGTGAAACCGGTGATCTTGAGGCTGATGCTGATTCACTATCTTGCATGAAGTCGGGATTGACTACTGCTGACCAAATGCATATTGATGGCTCTAAGCTGGGTAGTAAGCGATCTCGAACTGGAATGACCGAGTCATACGGTCAGGCTGGTGCAATCGGTAATGCATCTATGCAAGAAGGATATAACTCAATGGAAATCAACAATGATCAAGGTGGGTCCCAGTGGGACTGGGATGATGATGACAAAGGTGTTGTCATGGATATCCAAGCACTTCTCTCTGAGTTCGGAGATTTTGGTGATTTTTTCGAAAATGACGTTTTGCCATTTGGGGAGCCGCCAGGGACTGAGGAGTCACAAACACCGATGTTTTCCGCAACCGACGGTGGAGATGCAAGTAGCAGCCCGTTTACGGGGATGATCGATTCCTCCGACCCAATGATATTACCAGTCGGGTTTTCATCATTCGAGAGTTTCAATCCACCATCAACGGTTGTCGAGGAATCAATAAGCAAAAATCAAGAAACTACAAAAGACGCTTTATCTTCTGGATCAATGAACTATAATCCACCACCACCACCAACTTCTACCGAATTTGATTATTTGATAAAAGCGGAAGCCTTAATGACCTTTGCACCAGAATATGGAGCGGTTGAAACCCCGACAACTGATTTGTTATCATCAGTAATTAAAAGCCCGTACGTTCCGAAATCCCGAACAGCAGAGAGTGCAAATTCAAGTACAAGCAGCTACGTTTACTCTGCAATACCTCCCCATCATGATGCATCTGATGATAAATCTAAACCGACCATTGGTGTAAATTCAAAAGACAAATACTTGCTTCAATCGAGGAAATACTACACTCATGTTGAAAGCGGAAAAAACGATAAAAAAGACGAAAAACCGCCATCTCGTGATAATATTGTTGACGATGTTGCACCATCAGCATTATCATTATCGGGTTTTAATTCTTCGAATGCGGGTCTTAGGGCGTCTACTCGAAATAAGATAACGGAAAGTTTTCTTGTATCGTCAAAAATGGCGATTGCAAATGAGCTAGAGTGCATTATGTTTCAAGCTTTTATGTGCAAGATAAGGCATACGTTATTAACTCCCACCAGCTCGTTGCAAATGAATCGGTTATCTGGAAGTAATGTTCTGTATCAAATGCATGGTGAATCAAACGTTTTATCAGATAATATATCTAATAAATATGATATAAAGAAGAAAGAAACGATTCCCGTTAGAATTGCAGGTGATTTAGACAGTGGGCTGCTTGATGGGCCTTTAAACCCGCCCGTTGGTGTTTGGCGAACCGTTGGTGTCACTAAAGGTTCAAAATCCATGACACAGGGTATGGAACCGTTTGGGTCGTTACCGCATAACTCGTTTAATGAGGAAGGAATGTTGTCGTACGGTCAAAGGCAACCTCTTTTCGAGCTATTAGATGGACTGCCGTTGCTTTTTCAACAAGCAACGTCTTTTGTGGACGTGACGTTAGATGCGGATTGTGGGGATGGGCCTTATGGTTGGCTGGCAATGCAGGAGCAGTTGCGGCGGGGGTTTTCGTGTGGGCCCTCTTTGGTTCATGCGGGTTGTGGTGGGGTTTTGTCTTCTTGTCATGCTCTTGACATTGCGGGTGTTGAGCTGGCAGACCCACTTTCTGCTGATGTGCATGCATCATATGCAATCACTTTGCTACAGTCCGACATTAAATCAGCCTTGAAATCGGCCTTTGGCACCTTTGATGGACCCCTGACTGTCAGTGATTGGTGCAAAGGGCGAAACGGTCAAACTGATGTATTTTCAGCTGAATCATCTGCAAGCATAAATGATTCTTCGGTTGAGCCAATAAGCCCATCTCAATCTGCTGGTGGGTTCACATCTTATCTTAGCAGCAAAGATGGAACTCGAGTGGATGACATAAGCGAGTCAGAGCAGCAATTAGGACTCAGGCCTGCACTTCTCGTAATTCCTATTCCCGCTATTCTCGTCGGGTACCAGGATGATTGGCTAAAAACCTCAGCAACCTCTCTTCAACACTGGGAAAAAGCTCCTTTTGAACCTTATGCTATGCAGAAACACATGAATTACTGTGTCATTTGTCCTGATATAGACCCCCTTACAACTGCTGCTGCAGACTTCTTTCAACAACTAGAGACTGTGTATGAGACTTGCAAATTAGGAACTCATTCACCTCAAAATTTTGGGAACCAAACGGCTAAGGATTCCGGAAAATGGTCTTCTTCTGGTTTTGTTTTACTTGACTGCCCTCAATCGATGAAGATCGAAAGTGATAGTGCGTCTTTAGTGGGATCAATTAGTGATTATTTTCTTTCTTTATCTAACGGATGGGATTTAACAAGTTTCTTGAAGTCACTCTCGAAGGTCTTGAAAGCCCTAAAACTCGGTTCCTGTTTTGCCCCTAATTCAAAAGAAGGGAACAGCACTCCTTGTACAGTAATATATGTGGTGTGCCCGTTTCCCGAGCCAGTTGCGGTCTTGAAAACTATTGTTGAATCGTGTGTAGCTATTGGTTCAGTCGTATTTCCATCATCAGATAAAGAAAGAAGAACCGCAATGCAAAATCAAGTCGGGAAGGCGTTAAGTTGTTCTACAGCCGTAGACGAAGCATCGATATCAAACGTAGTGACGATTTCCGGTTTTAGTATCCCGAAACTGGTGTTACAAATCGTGACGGTTGATGCAATCTTTAGGGTCACAAGTCCGTCTCTTAACGAACCCGTTATTCTCAAGGAGATTGCTTTCACGGTCTACAATAAAGCCCGAAGAATCTCTCGAGGGTCATCTGCTGATGTCATCCCGTCAGTTTCAGTATCGGGTCGATCTCAGTCTCATTCAAGTATGATGCAAATGAATTCTCCGGTCCCAGGGATGTGGAAAGATTCTATCGGCTCGCGAATGGGGTCGAGAGAGGGTGAACTCGATGCTAGTTTACGCGCCGGTGTGTGGGATAACTCGTGGCAGATGTCCCGGTCCGATAGACCCGGAGAATATTATTTTCAAGACGAGCTGAAATACATGTTTGAGCCACTTTTTATTCTGGCTGAGCCAGGTTCGTCGGAACGCGGAGTGTCACCGGAGTCGTTAAAGCTTTTAACTGACGATGGTACGAGTTCTGATACTGGGCTGGGCTCTCAAATGGATGGATCTGATGACGGGTTCGGGTCGGGCCATCAGAAACAACCTCCGAGCCTACATTGTTGCTACGGTTGGACTGAGGATTGGCGGTGGCTCGTTTGCATATGGACCGATTCTCGAGGTGAATTGCTCGACAGCTGTACGTTCCCGTTTGGTGGAATTAGTAGTAGACAAGATACGAAAGGATTGCAATTTCTTTTCGTCCAAATTTTACAGCAAGGATGTCAGATACTACAGGCGTGTTCTTCAGATACAAACACCGCTAGGCCTCATGATTTTGTCATTACACGAATCGGGAGTTTTTTCGAGCTCGAATGCCAAGAATGGCAGAAAGCTCTTTATTCTATTGGCGGTTCAGAGGTCAAAAAGTGGTCATTGCAGCTTAGACGGTCGGTACCCGATGGAATTGCAGCCAGCAGCAACGGTGGCCCGTTACAACAGCAAGAAATGAGTATGATTCAAGACAGGAGTTTACAGTCACACGGCAAAGGTTCAAACTATATGAAAGGTGGGTTGGGTCAACCCATGAGTAGAAAGCAGTTGTTAAGCGGTGGTAGCGGCGGCAGTCATATTGCAATGGATAATTCAAAGGGCTTGCTTCAATGGGTGCAAAGCATCACTTTTGTATCGGTTTCCGTTGACCATTCACTACAGTTGGTTTATCAAGCTGATTCATCTCCAGGCACAACTCAAGGCAGTGGAATAATGGGCCAATCATGCTACGTTGAAGGATTCACACCCGTAAAATCTCTGGGGTCCGCATCCACATCGTATATATTTGTACCCTCACCCAGCATGCGGTTTCTCCCCCCGAACCCGCTCCAGCTGCCGACCTGCCTGACCTCCGAATCCCAACCGCTAGCACACCTCCTCCACAGCAAGGGTTCCGCCATTCCCATATCCACGGGTTTCGTCGTCTCGAAAGCGGTGCCTTCAATGCGCAAAGATTCTAGAAGCAATTGCAAAGAAGAATGGCCTTCGGTCCTATCCGTTGGACTTTTTGACTATTATGGAGGTAATAGTAATAATAACAATAACAATGGTAGTAATAATAATAACAATAATGAAAAAGCGAAAAACATTGGCAAATCGGGAATGGAAAATCATTTAATCTTGGAACGCGTAGCGGCTGAATTGCACGCGTTATCTTGGATGACGGTGAGCCCGGGGTATTTAGAAAGACGAACTGCACTTCCGTTTCATTGTGATATGGTTCTCAGACTTACGAGGCTTTTACATTTCGCTGATAAAGAATTATCTCAGCTTTCTGTAAAATCTGAAGTTTAG

Protein:   MWTNVFKIGGLHQVSWFQLLPNESDPILSDRSLKSNQKDTGAQLVISSHLQLQKDGFLSTWGNSFVGPWDPSQGLHNPDEKIKLWLFIPGRHSSVVDKAKAAVSKLRVFASGLWLAPGDSEEVAAALSQALRNCIERALMGLSYVRFGDVFSRYHSSSQGEELFRRGQPVLEFIFTATEEAVFVHVIISAKHVRALTNGDMETILKRTSSHSGVKLPVIVAPHGMRGRITGICPGDLVKQLYISSGKFKAINGIVGLPNQFSQSSGCQLRGQNCYIEVTLGCENAESEKSLPPNSNTSSKNHVSESSSVAKENEKTFIYPAEAVLVPLVQTSSARSSLKRFWLQNWMGQSLSSSSFSMQCDAFGTMDGSWHDNDMQTQHGYNSSGNSNSSSISTSSSSDSDYRMTGETGDLEADADSLSCMKSGLTTADQMHIDGSKLGSKRSRTGMTESYGQAGAIGNASMQEGYNSMEINNDQGGSQWDWDDDDKGVVMDIQALLSEFGDFGDFFENDVLPFGEPPGTEESQTPMFSATDGGDASSSPFTGMIDSSDPMILPVGFSSFESFNPPSTVVEESISKNQETTKDALSSGSMNYNPPPPPTSTEFDYLIKAEALMTFAPEYGAVETPTTDLLSSVIKSPYVPKSRTAESANSSTSSYVYSAIPPHHDASDDKSKPTIGVNSKDKYLLQSRKYYTHVESGKNDKKDEKPPSRDNIVDDVAPSALSLSGFNSSNAGLRASTRNKITESFLVSSKMAIANELECIMFQAFMCKIRHTLLTPTSSLQMNRLSGSNVLYQMHGESNVLSDNISNKYDIKKKETIPVRIAGDLDSGLLDGPLNPPVGVWRTVGVTKGSKSMTQGMEPFGSLPHNSFNEEGMLSYGQRQPLFELLDGLPLLFQQATSFVDVTLDADCGDGPYGWLAMQEQLRRGFSCGPSLVHAGCGGVLSSCHALDIAGVELADPLSADVHASYAITLLQSDIKSALKSAFGTFDGPLTVSDWCKGRNGQTDVFSAESSASINDSSVEPISPSQSAGGFTSYLSSKDGTRVDDISESEQQLGLRPALLVIPIPAILVGYQDDWLKTSATSLQHWEKAPFEPYAMQKHMNYCVICPDIDPLTTAAADFFQQLETVYETCKLGTHSPQNFGNQTAKDSGKWSSSGFVLLDCPQSMKIESDSASLVGSISDYFLSLSNGWDLTSFLKSLSKVLKALKLGSCFAPNSKEGNSTPCTVIYVVCPFPEPVAVLKTIVESCVAIGSVVFPSSDKERRTAMQNQVGKALSCSTAVDEASISNVVTISGFSIPKLVLQIVTVDAIFRVTSPSLNEPVILKEIAFTVYNKARRISRGSSADVIPSVSVSGRSQSHSSMMQMNSPVPGMWKDSIGSRMGSREGELDASLRAGVWDNSWQMSRSDRPGEYYFQDELKYMFEPLFILAEPGSSERGVSPESLKLLTDDGTSSDTGLGSQMDGSDDGFGSGHQKQPPSLHCCYGWTEDWRWLVCIWTDSRGELLDSCTFPFGGISSRQDTKGLQFLFVQILQQGCQILQACSSDTNTARPHDFVITRIGSFFELECQEWQKALYSIGGSEVKKWSLQLRRSVPDGIAASSNGGPLQQQEMSMIQDRSLQSHGKGSNYMKGGLGQPMSRKQLLSGGSGGSHIAMDNSKGLLQWVQSITFVSVSVDHSLQLVYQADSSPGTTQGSGIMGQSCYVEGFTPVKSLGSASTSYIFVPSPSMRFLPPNPLQLPTCLTSESQPLAHLLHSKGSAIPISTGFVVSKAVPSMRKDSRSNCKEEWPSVLSVGLFDYYGGNSNNNNNNGSNNNNNNEKAKNIGKSGMENHLILERVAAELHALSWMTVSPGYLERRTALPFHCDMVLRLTRLLHFADKELSQLSVKSEV